BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019B11LP1|AL427444
(1033 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1221 1976 0.0
>3x_Contig1221
Length = 4893
Score = 1976 bits (995), Expect = 0.0
Identities = 1021/1028 (99%), Gaps = 3/1028 (0%)
Strand = Plus / Minus
Query: 7 ctgnattcgataagcatgaatttttaaaacttatcaagaatatctcgtgtctgcaaaccg 66
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4893 ctggattcgataagcatgaatttttaaaacttatcaagaa-atctcgtgtctgcaaaccg 4835
Query: 67 aaacttttgatcacaggcccgcccggtaacgggttacaatatatcgcttccgccacacta 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4834 aaacttttgatcacaggcccgcccggtaacgggttacaatatatcgcttccgccacacta 4775
Query: 127 cactttttggaagattacaatattcaaatgcttgacattcctaccttggtatcggagagt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4774 cactttttggaagattacaatattcaaatgcttgacattcctaccttggtatcggagagt 4715
Query: 187 agtagaacgatggaagcagcacttgtacaaacattcgcggaggctaagaagcgtcaaccc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4714 agtagaacgatggaagcagcacttgtacaaacattcgcggaggctaagaagcgtcaaccc 4655
Query: 247 tctgtaatttgcataccaaacttagaattatggctccaagcctgtccccaaagttgtctc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4654 tctgtaatttgcataccaaacttagaattatggctccaagcctgtccccaaagttgtctc 4595
Query: 307 atcactttaaccactcttttcagatcattgcagagtaatgaaaacgtggttttactagct 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4594 atcactttaaccactcttttcagatcattgcagagtaatgaaaacgtggttttactagct 4535
Query: 367 atcgctgacggcttatctcgcgctgaaattgaggacggtccacttgcaatgttttccttt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4534 atcgctgacggcttatctcgcgctgaaattgaggacggtccacttgcaatgttttccttt 4475
Query: 427 gggcccaacatagtgaacattaacgaaccctcccctcatcaaaggtttatgtatttcaaa 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4474 gggcccaacatagtgaacattaacgaaccctcccctcatcaaaggtttatgtatttcaaa 4415
Query: 487 accgtagctgatcttattaagatgaaaccgactcaatacattgaatcgaggaaaaggaag 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4414 accgtagctgatcttattaagatgaaaccgactcaatacattgaatcgaggaaaaggaag 4355
Query: 547 aagccacttccaaaattacctgtcgtcgaaacctcacaggaaatagatgagaatggcaga 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4354 aagccacttccaaaattacctgtcgtcgaaacctcacaggaaatagatgagaatggcaga 4295
Query: 607 cttttaacagaagaggagaaattgagactggaattgaaaaagttccaacaccaagacatg 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4294 cttttaacagaagaggagaaattgagactggaattgaaaaagttccaacaccaagacatg 4235
Query: 667 aaattaaagaacaccttgaaaataaagctttctggtttaatggatcttttcaagaatcgt 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4234 aaattaaagaacaccttgaaaataaagctttctggtttaatggatcttttcaagaatcgt 4175
Query: 727 tacaagaggttcaggaaacctcctattgatgatacgttcttgattcacttatttgagcct 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4174 tacaagaggttcaggaaacctcctattgatgatacgttcttgattcacttatttgagcct 4115
Query: 787 gaaacctttgctg-cmaccaaggctggcaacctgcttatgtaaaggacggcgatatgatt 845
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4114 gaaacctttgctgccaaccaaggctggcaacctgcttatgtaaaggacggcgatatgatt 4055
Query: 846 ctcgaagttgctactggtagaaaattctataacatggatttggatattatcgaagagaga 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4054 ctcgaagttgctactggtagaaaattctataacatggatttggatattatcgaagagaga 3995
Query: 906 ttatggaatggktattactctgagccgaaacaattcctaaaagatatcgagttgatttat 965
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3994 ttatggaatggttattactctgagccgaaacaattcctaaaagatatcgagttgatttat 3935
Query: 966 cttgatgctaccacatcagcggacagagaaagagtwataaaaggcatctgaaatgtttgc 1025
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 3934 cttgatgctaccacatcagcggacagagaaagagtaat-aaaggcatctgaaatgtttgc 3876
Query: 1026 taatgcac 1033
||||||||
Sbjct: 3875 taatgcac 3868
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7430
Number of Sequences: 1807
Number of extensions: 7430
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 1033
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1017
effective length of database: 10,329,639
effective search space: 10505242863
effective search space used: 10505242863
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)